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Address a number of `DeprecationWarning`s that are issued when running tests #2986

Author avatar pkhalaj wants to merge changes into pytroll:main from pkhalaj:fix/deprecation-warnings 1 fixed issue

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Good code is its own best documentation. As you’re about to add a comment, ask yourself, ‘How can I improve the code so that this comment isn’t needed?’

– Steve McConnell