housw/Vahine

master

Vahine

Grade	Name	Complexity	Churn	Issues
A	calc_cov.sh		2	-
A	calc_cov_in_bam_depth.py	8	1	-
F	centrifuge_LCA.py	126	1	16
A	download_extract_virus_fna.sh		1	4
A	extract_pe_fastq_by_contigs.py	8	2	1
A	ftp_download_genomes_from_assembly_reports.py	7	1	1
A	generate_ACT_comparison_crunch.sh		2	-
A	reorder_gbk_according_to_fna.py	14	1	-
A	slice_bam_by_contigs.sh		1	2
A	utils\Blast.py	10	2	-
A	utils\Centrifuge.py	14	2	-
A	utils\Fasta.py	12	2	2
A	utils\Fastq.py	10	1	-
A	utils\SAM.py	21	1	-
F	utils\Taxonomy.py	83	2	13