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docs\source\_static\covigator_pipeline_sample_output_reads\ERR4145453.fastp_stats.html
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covigator\tests\integration_tests\test_downloader.py
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docs\source\conf.py
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covigator\processor\ena_downloader.py
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scripts\sql\20210630_patch_add_annotation_highest_impact.sql
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covigator\misc\backoff_retrier.py
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.github\workflows\documentation.yml
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covigator\tests\unit_tests\test_lineage_annotation.py
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covigator\misc\compression.py
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scripts\sql\20221125_patch_add_variant_type_COMPLEX.sql
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covigator\tests\integration_tests\integration_tests.py
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scripts\sql\20211027_path_remove_rnaseq_samples.sql
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scripts\sql\20210626_patch_add_variant_annotations.sql
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scripts\sql\20230104_patch_reclassify_variants_by_vaf.sql
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scripts\sql\20230105_path_collection_date_in_variants.sql
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scripts\sql\20230105_patch_high_quality_intrahost.sql
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scripts\sql\20210630_patch_add_variant_length.sql
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scripts\sql\20210630_patch_add_sample_annotations.sql
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scripts\bash\kill_dashboard.sh
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covigator\dashboard\assets\styles.css
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