master
MiCoNE
Repository badge with BMinus rating
View on GitHub
Grade
Name
Complexity
Churn
Issues
A
micone\pipelines\templates\denoise_cluster\otu_assignment\cluster_closed_reference.sh
 3 -
A
micone\pipelines\templates\sequence_processing\demultiplexing\demultiplex_illumina_single.sh
 2 -
A
micone\pipelines\templates\denoise_cluster\otu_assignment\cluster_open_reference.sh
 3 -
A
micone\pipelines\envs\micone-cozine\env.yml
 2 -
A
micone\pipelines\templates\denoise_cluster\otu_assignment\dada2_single.R
 6 -
A
micone\pipelines\templates\sequence_processing\demultiplexing\export_sequences.sh
 3 1
A
micone\pipelines\envs\micone-dada2\env.yml
 2 -
A
micone\pipelines\templates\network_inference\direct\harmonies.R
 2 1
A
micone\pipelines\envs\micone-flashweave\env.yml
 2 -
A
micone\pipelines\templates\sequence_processing\trimming\export_visualization.py
 1 -
A
micone\pipelines\envs\micone-flashweave\post_install.sh
 3 1
A
micone\logging\__init__.py
 1 1
A
micone\pipelines\envs\micone-harmonies\env.yml
 2 -
A
micone\pipelines\templates\network_inference\direct\spieceasi.R
 4 1
A
micone\pipelines\templates\sequence_processing\trimming\trimming_paired.R
 3 -
A
micone\pipelines\templates\sequence_processing\trimming\import_sequences_single.sh
 2 1
A
micone\pipelines\templates\sequence_processing\trimming\import_sequences_paired.sh
 1 1
A
micone\pipelines\templates\sequence_processing\demultiplexing\import_sequences_single.sh
 1 -
A
micone\pipelines\templates\sequence_processing\demultiplexing\import_sequences_paired.sh
 1 -
A
micone\pipelines\envs\micone-mldm\env.yml
 2 -