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MiCoNE
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Grade
Name
Complexity
Churn
Issues
F
micone\main\network.py
80 4 25
A
micone\__init__.py
 4 -
A
micone\pipelines\templates\otu_processing\transform\normalize_filter.py
4 4 3
D
tests\config\test_params.py
19 4 19
A
micone\pipelines\templates\denoise_cluster\otu_assignment\make_biom_repseqs.py
6 4 5
D
tests\conftest.py
47 4 23
F
tests\pipelines\test_process.py
48 4 33
A
micone\pipelines\templates\network_inference\correlation\propr.R
 4 -
A
micone\pipelines\templates\network_inference\correlation\sparcc.sh
 4 -
A
micone\pipelines\templates\network_inference\network\create_consensus.py
2 5 5
A
micone\pipelines\templates\network_inference\network\merge_pvalues.py
2 5 2
A
micone\pipelines\templates\otu_processing\transform\fork.py
3 5 5
C
micone\main\otu.py
46 5 9
A
micone\setup\environments.py
12 5 -
A
micone\pipelines\templates\denoise_cluster\otu_assignment\fastq2fasta.py
12 5 9
C
tests\main\test_network.py
18 5 17
A
micone\pipelines\templates\network_inference\network\make_network_with_pvalue.py
3 6 5
A
micone\pipelines\templates\denoise_cluster\otu_assignment\dada2_paired.R
 6 -
A
micone\pipelines\templates\denoise_cluster\otu_assignment\dada2_single.R
 6 -
A
micone\pipelines\templates\denoise_cluster\otu_assignment\deblur.sh
 6 -