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MiCoNE
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micone\main\__init__.py
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micone\pipelines\templates\network_inference\direct\spieceasi.R
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micone\pipelines\envs\micone-propr\post_install.sh
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micone\pipelines\templates\network_inference\network\create_consensus.py
2 5 5
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.github\workflows\build.yml
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micone\pipelines\templates\network_inference\network\make_network_without_pvalue.py
3 8 6
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micone\pipelines\envs\micone-qiime2\post_install.sh
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micone\pipelines\templates\otu_processing\export\biom2tsv.py
1 2 2
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.readthedocs.yml
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micone\pipelines\templates\otu_processing\transform\group.py
1 2 6
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micone\pipelines\envs\micone-spieceasi\env.yml
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micone\pipelines\templates\sequence_processing\demultiplexing\demultiplex_illumina_paired.sh
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micone\pipelines\templates\sequence_processing\demultiplexing\import_sequences_paired.sh
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micone\pipelines\templates\sequence_processing\trimming\import_sequences_single.sh
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micone\pipelines\templates\sequence_processing\trimming\import_sequences_paired.sh
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micone\pipelines\templates\sequence_processing\demultiplexing\import_sequences_single.sh
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.pyup.yml
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micone\logging\logger.py
5 2 1
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micone\pipelines\envs\micone-mldm\env.yml
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micone\pipelines\templates\network_inference\correlation\spearman.py
7 2 5