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micone\pipelines\templates\sequence_processing\trimming\import_sequences_single.sh
 2 1
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micone\pipelines\templates\sequence_processing\trimming\import_sequences_paired.sh
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micone\pipelines\templates\sequence_processing\trimming\export_visualization.py
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micone\pipelines\templates\sequence_processing\demultiplexing\import_sequences_single.sh
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micone\pipelines\templates\sequence_processing\demultiplexing\import_sequences_paired.sh
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micone\pipelines\templates\sequence_processing\demultiplexing\export_sequences.sh
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micone\pipelines\templates\sequence_processing\demultiplexing\demultiplex_illumina_single.sh
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micone\pipelines\templates\sequence_processing\demultiplexing\demultiplex_illumina_paired.sh
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micone\pipelines\templates\otu_processing\transform\normalize_filter.py
4 4 3
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micone\pipelines\templates\otu_processing\transform\group.py
1 2 6
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micone\pipelines\templates\otu_processing\transform\fork.py
3 5 5
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micone\pipelines\templates\otu_processing\export\biom2tsv.py
1 2 2
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micone\pipelines\templates\network_inference\network\merge_pvalues.py
2 5 2
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micone\pipelines\templates\network_inference\network\make_network_without_pvalue.py
3 8 6
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micone\pipelines\templates\network_inference\network\make_network_with_pvalue.py
3 6 5
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micone\pipelines\templates\network_inference\network\create_consensus.py
2 5 5
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micone\pipelines\templates\network_inference\direct\spring.R
 3 1
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micone\pipelines\templates\network_inference\direct\spieceasi.R
 4 1
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micone\pipelines\templates\network_inference\direct\mldm.R
 11 2
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micone\pipelines\templates\network_inference\direct\harmonies.R
 2 1