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ViroConstrictor
7
issues
1
pull request
39
files
3
active branches
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CodeFactor Rating A
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Grade
Name
Complexity
Churn
Issues
A
ViroConstrictor\workflow\files\multiqc_config.yaml
1
-
A
ViroConstrictor\workflow\presets.py
11
4
-
A
ViroConstrictor\workflow\scripts\amplicon_covs.py
44
9
1
A
ViroConstrictor\workflow\scripts\boc.py
2
-
A
ViroConstrictor\workflow\scripts\clipper.py
9
3
-
A
ViroConstrictor\workflow\scripts\concat_amplicon_covs.py
3
4
-
A
ViroConstrictor\workflow\scripts\extract_gff.py
2
-
A
ViroConstrictor\workflow\scripts\fastqc_wrapper.sh
1
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A
ViroConstrictor\workflow\scripts\filter_bed_input.py
4
-
A
ViroConstrictor\workflow\scripts\group_aminoacids.py
2
1
A
ViroConstrictor\workflow\scripts\match_ref\count_mapped_reads.py
1
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A
ViroConstrictor\workflow\scripts\match_ref\filter_bed.py
1
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A
ViroConstrictor\workflow\scripts\match_ref\filter_best_matching_ref.py
1
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A
ViroConstrictor\workflow\scripts\match_ref\filter_gff.py
1
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A
ViroConstrictor\workflow\scripts\match_ref\group_refs.py
2
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A
ViroConstrictor\workflow\scripts\vcf_to_tsv.py
2
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A
env.yml
20
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A
mkdocs.yml
5
-
A
setup.py
12
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