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SARS2seq
7
issues
1
pull request
31
files
3
active branches
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CodeFactor Rating A
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Grade
Name
Complexity
Churn
Issues
A
SARS2seq\workflow\scripts\AA_extract.py
4
-
A
SARS2seq\validatefasta.py
6
2
-
A
SARS2seq\workflow\scripts\Subtypingpicker.py
11
2
-
A
SARS2seq\workflow\envs\Typing.yaml
14
-
A
SARS2seq\workflow\envs\Alignment.yaml
5
-
A
SARS2seq\userprofile.py
31
3
-
A
SARS2seq\version.py
21
-
A
SARS2seq\workflow\scripts\boc.py
2
-
A
SARS2seq\workflow\directories.py
2
-
A
SARS2seq\runreport.py
11
3
-
A
SARS2seq\workflow\envs\Mutations.yaml
4
-
A
SARS2seq\workflow\envs\Clean.yaml
13
-
A
SARS2seq\functions.py
10
3
-
A
SARS2seq\workflow\files\multiqc_config.yaml
1
-
A
.github\workflows\sync.yml
2
-
A
SARS2seq\workflow\scripts\concat_amplicon_covs.py
3
3
-
A
SARS2seq\workflow\scripts\clipper.py
2
-
A
.github\workflows\release.yml
4
-
A
SARS2seq\samplesheet.py
19
3
-
A
SARS2seq\workflow\envs\Consensus.yaml
7
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