main
SARS2seq
Repository badge with A rating
View on GitHub
Grade
Name
Complexity
Churn
Issues
A
SARS2seq\workflow\scripts\overlap_coords.py
50 4 1
A
SARS2seq\workflow\scripts\amplicon_covs.py
43 6 1
A
SARS2seq\userprofile.py
31 3 -
B
SARS2seq\SARS2seq.py
23 7 2
A
SARS2seq\samplesheet.py
19 3 -
A
SARS2seq\runconfigs.py
17 9 1
A
SARS2seq\update.py
14 1 2
A
SARS2seq\runreport.py
11 3 -
A
SARS2seq\workflow\scripts\Subtypingpicker.py
11 2 -
A
SARS2seq\functions.py
10 3 -
A
SARS2seq\validatefasta.py
6 2 -
A
SARS2seq\workflow\scripts\index_rawalign.py
4 2 -
A
SARS2seq\workflow\scripts\concat_amplicon_covs.py
3 3 -
A
SARS2seq\workflow\envs\Mutations.yaml
 4 -
A
SARS2seq\workflow\envs\Typing.yaml
 14 -
A
SARS2seq\workflow\files\multiqc_config.yaml
 1 -
A
SARS2seq\workflow\scripts\AA_extract.py
 4 -
A
.github\workflows\sync.yml
 2 -
A
SARS2seq\version.py
 21 -
A
SARS2seq\workflow\directories.py
 2 -