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devel
molgenis-c5-TumorNormal
352
issues
0
pull requests
118
files
2
active branches
×
CodeFactor Rating B
{{format.Name}}
Grade
Name
Complexity
Churn
Issues
A
workflows\protocols\GatkAnalyseCovariants.sh
1
2
A
workflows\protocols\CalculateHsMetrics.sh
1
2
A
workflows\protocols\GatkHaplotypeCallerGvcf2.sh
1
2
A
workflows\protocols\AddOrReplaceReadGroups.sh
1
3
A
workflows\protocols\FusionCatcher.sh
1
2
B
workflows\protocols\CoNVaDING.sh
1
8
A
scripts\metaVcf.py
1
3
A
workflows\protocols\GatkContEst.sh
1
2
A
workflows\protocols\GatkDepthOfCoverage.sh
1
2
A
workflows\protocols\GatkSelectSNVWithPolyMorfic.sh
1
2
A
workflows\protocols\AddCustomVcfAnnotation.sh
1
1
B
workflows\protocols\Fastqc.sh
1
7
A
workflows\protocols\CreatePaddedTargets.sh
1
4
A
workflows\protocols\GenerateCluster.sh
1
2
A
workflows\protocols\LexogenPreAlign.sh
1
2
A
workflows\protocols\IontBamToFastq.sh
1
2
A
workflows\protocols\GatkIndelRealignment.sh
1
2
A
workflows\protocols\GatkHaplotypeCallerGvcf.sh
1
2
A
workflows\protocols\Cutadapt.sh
1
2
F
scripts\bootstrap_eb.py
110
1
10
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