jmmut/eva-pipeline

develop

eva-pipeline

Grade	Name	Complexity	Churn	Issues
A	src\main\java\uk\ac\ebi\eva\pipeline\configuration\MongoConfiguration.java	15	3	-
A	src\main\java\uk\ac\ebi\eva\pipeline\configuration\PostgreDataSourceConfiguration.java	1	4	-
A	src\main\java\uk\ac\ebi\eva\pipeline\configuration\readers\GeneReaderConfiguration.java	1	2	-
A	src\main\java\uk\ac\ebi\eva\pipeline\configuration\readers\VariantAnnotationReaderConfiguration.java	1	4	-
A	src\main\java\uk\ac\ebi\eva\pipeline\configuration\readers\VariantsMongoReaderConfiguration.java	1	1	-
A	src\main\java\uk\ac\ebi\eva\pipeline\configuration\readers\VcfReaderConfiguration.java	4	3	-
A	src\main\java\uk\ac\ebi\eva\pipeline\configuration\writers\GeneWriterConfiguration.java	1	4	-
A	src\main\java\uk\ac\ebi\eva\pipeline\configuration\writers\VariantAnnotationWriterConfiguration.java	1	4	-
A	src\main\java\uk\ac\ebi\eva\pipeline\configuration\writers\VariantWriterConfiguration.java	3	5	-
A	src\main\java\uk\ac\ebi\eva\pipeline\configuration\writers\VepAnnotationFileWriterConfiguration.java	1	1	-
A	src\main\java\uk\ac\ebi\eva\pipeline\io\GzipLazyResource.java	3	3	-
A	src\main\java\uk\ac\ebi\eva\pipeline\io\VepProcess.java	8	2	-
A	src\main\java\uk\ac\ebi\eva\pipeline\io\mappers\AggregatedVcfLineMapper.java	8	4	1
A	src\main\java\uk\ac\ebi\eva\pipeline\io\mappers\AnnotationLineMapper.java	33	5	-
A	src\main\java\uk\ac\ebi\eva\pipeline\io\mappers\GeneLineMapper.java	2	4	-
A	src\main\java\uk\ac\ebi\eva\pipeline\io\mappers\VariantAggregatedVcfFactory.java	73	3	1
A	src\main\java\uk\ac\ebi\eva\pipeline\io\mappers\VariantVcfEVSFactory.java	31	2	2
A	src\main\java\uk\ac\ebi\eva\pipeline\io\mappers\VariantVcfExacFactory.java	48	2	2
B	src\main\java\uk\ac\ebi\eva\pipeline\io\mappers\VariantVcfFactory.java	63	5	3
A	src\main\java\uk\ac\ebi\eva\pipeline\io\mappers\VcfLineMapper.java	2	5	-