Clinical-Genomics/BALSAMIC

master

BALSAMIC

Grade	Name	Complexity	Churn	Issues
A	container_tests\varcall_py27\varcall_py27.sh		1	1
A	container_tests\somalier\somalier.sh		1	1
A	container_tests\purecn\purecn.sh		1	1
A	container_tests\multiqc\multiqc.sh		1	1
A	container_tests\msisensorpro\msisensorpro.sh		1	1
A	container_tests\htslib\htslib.sh		1	1
A	container_tests\gatk\gatk.sh		1	1
A	container_tests\delly\delly.sh		2	1
A	container_tests\coverage_qc\coverage_qc.sh		1	1
A	container_tests\cnvpytor\cnvpytor.sh		1	1
A	container_tests\cnvkit\cnvkit.sh		1	1
A	container_tests\cadd\cadd.sh		1	1
A	container_tests\balsamic\balsamic.sh		1	1
A	container_tests\ascatNgs\ascatNgs.sh		1	1
A	container_tests\annotate\annotate.sh		2	-
A	container_tests\align_qc\align_qc.sh		1	1
A	codecov.yml		1	-
A	BALSAMIC\utils\workflowscripts.py	5	3	-
A	BALSAMIC\utils\utils.py	5	1	-
A	BALSAMIC\utils\rule.py	52	7	-